Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-6P43688 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-6P43688 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nkx2-6P43688 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.71□□□□□ -0.21
Nkx2-6P43688 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.71□□□□□ -0.21
Nkx2-6P43688 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nkx2-6P43688 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-6P43688 Gm16476-201ENSMUST00000221544 139 ntBASIC13.71□□□□□ -0.21
Nkx2-6P43688 Shd-206ENSMUST00000225145 998 ntBASIC13.71□□□□□ -0.21
Nkx2-6P43688 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-6P43688 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nkx2-6P43688 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nkx2-6P43688 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-6P43688 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-6P43688 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-6P43688 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Nkx2-6P43688 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-6P43688 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-6P43688 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-6P43688 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-6P43688 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-6P43688 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-6P43688 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-6P43688 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-6P43688 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-6P43688 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nkx2-6P43688 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.7□□□□□ -0.22
Nkx2-6P43688 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Nkx2-6P43688 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Gm9182-201ENSMUST00000217829 639 ntBASIC13.7□□□□□ -0.22
Nkx2-6P43688 Gm2423-201ENSMUST00000074863 733 ntBASIC13.7□□□□□ -0.22
Nkx2-6P43688 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-6P43688 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.7□□□□□ -0.22
Nkx2-6P43688 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-6P43688 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.69□□□□□ -0.22
Nkx2-6P43688 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.69□□□□□ -0.22
Nkx2-6P43688 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.69□□□□□ -0.22
Nkx2-6P43688 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Efs-202ENSMUST00000227037 2540 ntBASIC13.69□□□□□ -0.22
Nkx2-6P43688 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-6P43688 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Gm15321-201ENSMUST00000121290 288 ntBASIC13.68□□□□□ -0.22
Nkx2-6P43688 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Olfr286-202ENSMUST00000205305 969 ntBASIC13.68□□□□□ -0.22
Nkx2-6P43688 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nkx2-6P43688 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms