Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sox18P43680 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Sox18P43680 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox18P43680 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox18P43680 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox18P43680 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Sox18P43680 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Gm13392-201ENSMUST00000117708 150 ntBASIC13.88□□□□□ -0.19
Sox18P43680 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.88□□□□□ -0.19
Sox18P43680 Gm6222-201ENSMUST00000120787 396 ntBASIC13.88□□□□□ -0.19
Sox18P43680 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.88□□□□□ -0.19
Sox18P43680 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.88□□□□□ -0.19
Sox18P43680 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.88□□□□□ -0.19
Sox18P43680 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.88□□□□□ -0.19
Sox18P43680 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.88□□□□□ -0.19
Sox18P43680 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Sox18P43680 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sox18P43680 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox18P43680 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox18P43680 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Sox18P43680 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sox18P43680 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sox18P43680 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.87□□□□□ -0.19
Sox18P43680 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sox18P43680 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sox18P43680 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Sox18P43680 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Sox18P43680 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Sox18P43680 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.87□□□□□ -0.19
Sox18P43680 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sox18P43680 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Gm29310-201ENSMUST00000185468 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21825-201ENSMUST00000185728 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm29109-201ENSMUST00000185895 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21896-201ENSMUST00000186520 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21873-201ENSMUST00000186728 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21794-201ENSMUST00000187056 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21880-201ENSMUST00000187275 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21826-201ENSMUST00000187451 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21198-201ENSMUST00000188393 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm28911-201ENSMUST00000188837 117 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21749-201ENSMUST00000189343 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm5244-202ENSMUST00000189517 743 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21901-201ENSMUST00000189568 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm29424-201ENSMUST00000189716 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.87□□□□□ -0.19
Sox18P43680 Gm28599-201ENSMUST00000189838 694 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21867-201ENSMUST00000189917 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm29269-201ENSMUST00000190087 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21722-201ENSMUST00000190153 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm28423-201ENSMUST00000190701 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21899-201ENSMUST00000190745 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21910-201ENSMUST00000191163 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21849-201ENSMUST00000191571 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm28678-201ENSMUST00000191593 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm20910-201ENSMUST00000193268 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Gm21871-201ENSMUST00000194621 696 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms