Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14□□□□□ -0.17
Tnfsf4P43488 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Tnfsf4P43488 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14□□□□□ -0.17
Tnfsf4P43488 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Tnfsf4P43488 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14□□□□□ -0.17
Tnfsf4P43488 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tnfsf4P43488 Gm6944-201ENSMUST00000182449 1006 ntBASIC14□□□□□ -0.17
Tnfsf4P43488 Gm5864-201ENSMUST00000202263 970 ntBASIC14□□□□□ -0.17
Tnfsf4P43488 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14□□□□□ -0.17
Tnfsf4P43488 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tnfsf4P43488 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Gm15590-201ENSMUST00000078419 552 ntBASIC14□□□□□ -0.17
Tnfsf4P43488 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Tnfsf4P43488 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tnfsf4P43488 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf4P43488 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14□□□□□ -0.17
Tnfsf4P43488 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Gm14042-201ENSMUST00000120139 833 ntBASIC13.99□□□□□ -0.17
Tnfsf4P43488 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.99□□□□□ -0.17
Tnfsf4P43488 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Tnfsf4P43488 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.99□□□□□ -0.17
Tnfsf4P43488 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfsf4P43488 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.98□□□□□ -0.17
Tnfsf4P43488 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Gm13884-201ENSMUST00000118103 829 ntBASIC13.98□□□□□ -0.17
Tnfsf4P43488 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Gm27628-201ENSMUST00000184911 107 ntBASIC13.98□□□□□ -0.17
Tnfsf4P43488 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfsf4P43488 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Tnfsf4P43488 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms