Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cdx2P43241 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Cdx2P43241 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Cdx2P43241 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.7□□□□□ -0.22
Cdx2P43241 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Gm27892-201ENSMUST00000185017 106 ntBASIC13.7□□□□□ -0.22
Cdx2P43241 AY702102-202ENSMUST00000194651 1173 ntBASIC13.7□□□□□ -0.22
Cdx2P43241 Gm5279-201ENSMUST00000199575 745 ntBASIC13.7□□□□□ -0.22
Cdx2P43241 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cdx2P43241 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.7□□□□□ -0.22
Cdx2P43241 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cdx2P43241 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdx2P43241 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdx2P43241 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Cdx2P43241 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Cdx2P43241 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cdx2P43241 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx2P43241 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.69□□□□□ -0.22
Cdx2P43241 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Cdx2P43241 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdx2P43241 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.69□□□□□ -0.22
Cdx2P43241 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.69□□□□□ -0.22
Cdx2P43241 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdx2P43241 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdx2P43241 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.69□□□□□ -0.22
Cdx2P43241 Mir7654-201ENSMUST00000185082 70 ntBASIC13.69□□□□□ -0.22
Cdx2P43241 Gm21470-201ENSMUST00000187680 696 ntBASIC13.69□□□□□ -0.22
Cdx2P43241 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdx2P43241 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdx2P43241 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdx2P43241 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Cdx2P43241 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdx2P43241 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdx2P43241 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdx2P43241 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdx2P43241 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdx2P43241 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdx2P43241 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Cdx2P43241 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Cdx2P43241 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdx2P43241 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdx2P43241 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdx2P43241 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdx2P43241 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.68□□□□□ -0.22
Cdx2P43241 Gm17795-201ENSMUST00000214505 757 ntBASIC13.68□□□□□ -0.22
Cdx2P43241 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdx2P43241 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cdx2P43241 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms