Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TfamP40630 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TfamP40630 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TfamP40630 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TfamP40630 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TfamP40630 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TfamP40630 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.05□□□□□ -0.16
TfamP40630 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TfamP40630 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TfamP40630 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.04□□□□□ -0.16
TfamP40630 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TfamP40630 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.04□□□□□ -0.16
TfamP40630 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.04□□□□□ -0.16
TfamP40630 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.04□□□□□ -0.16
TfamP40630 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.04□□□□□ -0.16
TfamP40630 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.04□□□□□ -0.16
TfamP40630 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.04□□□□□ -0.16
TfamP40630 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.04□□□□□ -0.16
TfamP40630 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.04□□□□□ -0.16
TfamP40630 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.04□□□□□ -0.16
TfamP40630 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.04□□□□□ -0.16
TfamP40630 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.04□□□□□ -0.16
TfamP40630 Gm10154-201ENSMUST00000084445 354 ntBASIC14.04□□□□□ -0.16
TfamP40630 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TfamP40630 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.04□□□□□ -0.16
TfamP40630 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TfamP40630 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.03□□□□□ -0.16
TfamP40630 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.03□□□□□ -0.16
TfamP40630 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TfamP40630 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TfamP40630 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TfamP40630 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.03□□□□□ -0.16
TfamP40630 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.03□□□□□ -0.16
TfamP40630 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.03□□□□□ -0.16
TfamP40630 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.03□□□□□ -0.16
TfamP40630 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TfamP40630 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TfamP40630 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.03□□□□□ -0.16
TfamP40630 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TfamP40630 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms