Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Mir8098-201ENSMUST00000184011 137 ntBASIC14.6□□□□□ -0.07
Fen1P39749 Gm5864-201ENSMUST00000202263 970 ntBASIC14.6□□□□□ -0.07
Fen1P39749 Gm34391-201ENSMUST00000203706 907 ntBASIC14.6□□□□□ -0.07
Fen1P39749 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.6□□□□□ -0.07
Fen1P39749 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.6□□□□□ -0.07
Fen1P39749 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Fen1P39749 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.6□□□□□ -0.07
Fen1P39749 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.59□□□□□ -0.07
Fen1P39749 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.59□□□□□ -0.07
Fen1P39749 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Fen1P39749 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.59□□□□□ -0.07
Fen1P39749 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.59□□□□□ -0.07
Fen1P39749 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.59□□□□□ -0.07
Fen1P39749 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Fen1P39749 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Fen1P39749 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Fen1P39749 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.59□□□□□ -0.07
Fen1P39749 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.59□□□□□ -0.07
Fen1P39749 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Fen1P39749 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.58□□□□□ -0.07
Fen1P39749 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Fen1P39749 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Fen1P39749 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.58□□□□□ -0.08
Fen1P39749 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.58□□□□□ -0.08
Fen1P39749 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.58□□□□□ -0.08
Fen1P39749 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.58□□□□□ -0.08
Fen1P39749 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.58□□□□□ -0.08
Fen1P39749 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.58□□□□□ -0.08
Fen1P39749 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Fen1P39749 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Fen1P39749 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.58□□□□□ -0.08
Fen1P39749 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fen1P39749 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.57□□□□□ -0.08
Fen1P39749 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.57□□□□□ -0.08
Fen1P39749 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Fen1P39749 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Fen1P39749 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fen1P39749 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.57□□□□□ -0.08
Fen1P39749 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms