Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HmgclP38060 Gm25287-201ENSMUST00000103846 110 ntBASIC14.27□□□□□ -0.13
HmgclP38060 Gm22918-201ENSMUST00000103855 110 ntBASIC14.27□□□□□ -0.13
HmgclP38060 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.27□□□□□ -0.13
HmgclP38060 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.27□□□□□ -0.13
HmgclP38060 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.27□□□□□ -0.13
HmgclP38060 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.27□□□□□ -0.13
HmgclP38060 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HmgclP38060 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.27□□□□□ -0.13
HmgclP38060 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.27□□□□□ -0.13
HmgclP38060 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HmgclP38060 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HmgclP38060 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.27□□□□□ -0.13
HmgclP38060 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HmgclP38060 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HmgclP38060 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HmgclP38060 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HmgclP38060 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HmgclP38060 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HmgclP38060 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HmgclP38060 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HmgclP38060 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.27□□□□□ -0.13
HmgclP38060 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HmgclP38060 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HmgclP38060 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
HmgclP38060 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.26□□□□□ -0.13
HmgclP38060 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
HmgclP38060 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HmgclP38060 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HmgclP38060 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.26□□□□□ -0.13
HmgclP38060 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.26□□□□□ -0.13
HmgclP38060 Gm37935-201ENSMUST00000192012 982 ntBASIC14.26□□□□□ -0.13
HmgclP38060 Gm44335-201ENSMUST00000196879 141 ntBASIC14.26□□□□□ -0.13
HmgclP38060 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.26□□□□□ -0.13
HmgclP38060 Gm44297-201ENSMUST00000198304 141 ntBASIC14.26□□□□□ -0.13
HmgclP38060 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.26□□□□□ -0.13
HmgclP38060 Gm44346-201ENSMUST00000198851 141 ntBASIC14.26□□□□□ -0.13
HmgclP38060 Gm43125-201ENSMUST00000201724 730 ntBASIC14.26□□□□□ -0.13
HmgclP38060 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.26□□□□□ -0.13
HmgclP38060 Chchd1-203ENSMUST00000224633 557 ntBASIC14.26□□□□□ -0.13
HmgclP38060 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HmgclP38060 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HmgclP38060 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HmgclP38060 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HmgclP38060 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HmgclP38060 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HmgclP38060 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HmgclP38060 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.25□□□□□ -0.13
HmgclP38060 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
HmgclP38060 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.25□□□□□ -0.13
HmgclP38060 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.25□□□□□ -0.13
HmgclP38060 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HmgclP38060 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HmgclP38060 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms