Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Sftpa1P35242 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sftpa1P35242 BC001981-202ENSMUST00000191393 1545 ntBASIC13.34□□□□□ -0.27
Sftpa1P35242 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Sftpa1P35242 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Sftpa1P35242 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sftpa1P35242 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sftpa1P35242 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sftpa1P35242 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Sftpa1P35242 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sftpa1P35242 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sftpa1P35242 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Sftpa1P35242 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.33□□□□□ -0.28
Sftpa1P35242 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sftpa1P35242 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sftpa1P35242 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sftpa1P35242 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sftpa1P35242 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.32□□□□□ -0.28
Sftpa1P35242 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sftpa1P35242 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.32□□□□□ -0.28
Sftpa1P35242 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.32□□□□□ -0.28
Sftpa1P35242 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Sftpa1P35242 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Gm9726-201ENSMUST00000180321 678 ntBASIC13.32□□□□□ -0.28
Sftpa1P35242 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.32□□□□□ -0.28
Sftpa1P35242 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sftpa1P35242 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.32□□□□□ -0.28
Sftpa1P35242 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sftpa1P35242 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Sftpa1P35242 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Sftpa1P35242 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sftpa1P35242 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Gm12390-201ENSMUST00000117897 397 ntBASIC13.31□□□□□ -0.28
Sftpa1P35242 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.31□□□□□ -0.28
Sftpa1P35242 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
Sftpa1P35242 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.31□□□□□ -0.28
Sftpa1P35242 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sftpa1P35242 Gm27839-201ENSMUST00000184242 106 ntBASIC13.31□□□□□ -0.28
Sftpa1P35242 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.31□□□□□ -0.28
Sftpa1P35242 Gm5356-201ENSMUST00000093326 615 ntBASIC13.31□□□□□ -0.28
Sftpa1P35242 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Sftpa1P35242 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms