Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.46□□□□□ -0.58
Rom1P32958 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.46□□□□□ -0.58
Rom1P32958 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rom1P32958 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rom1P32958 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rom1P32958 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.45□□□□□ -0.58
Rom1P32958 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rom1P32958 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rom1P32958 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Gm15372-201ENSMUST00000120729 834 ntBASIC11.45□□□□□ -0.58
Rom1P32958 Gm13836-201ENSMUST00000121159 501 ntBASIC11.45□□□□□ -0.58
Rom1P32958 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.45□□□□□ -0.58
Rom1P32958 Gm25925-201ENSMUST00000158314 306 ntBASIC11.45□□□□□ -0.58
Rom1P32958 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rom1P32958 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.45□□□□□ -0.58
Rom1P32958 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Rom1P32958 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rom1P32958 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rom1P32958 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Rom1P32958 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rom1P32958 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Rom1P32958 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rom1P32958 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.44□□□□□ -0.58
Rom1P32958 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.44□□□□□ -0.58
Rom1P32958 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.44□□□□□ -0.58
Rom1P32958 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Rom1P32958 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.44□□□□□ -0.58
Rom1P32958 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Gm27867-201ENSMUST00000184778 125 ntBASIC11.44□□□□□ -0.58
Rom1P32958 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.44□□□□□ -0.58
Rom1P32958 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Rom1P32958 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
Rom1P32958 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.44□□□□□ -0.58
Rom1P32958 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rom1P32958 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Rom1P32958 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.43□□□□□ -0.58
Rom1P32958 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rom1P32958 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rom1P32958 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rom1P32958 Gm13464-201ENSMUST00000119418 935 ntBASIC11.43□□□□□ -0.58
Rom1P32958 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms