Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc11P31313 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc11P31313 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.05□□□□□ -0.16
Hoxc11P31313 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxc11P31313 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc11P31313 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc11P31313 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.05□□□□□ -0.16
Hoxc11P31313 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc11P31313 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.05□□□□□ -0.16
Hoxc11P31313 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc11P31313 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Hoxc11P31313 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc11P31313 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc11P31313 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxc11P31313 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.04□□□□□ -0.16
Hoxc11P31313 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Gm25144-201ENSMUST00000179561 110 ntBASIC14.04□□□□□ -0.16
Hoxc11P31313 Gm25352-201ENSMUST00000179815 110 ntBASIC14.04□□□□□ -0.16
Hoxc11P31313 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.04□□□□□ -0.16
Hoxc11P31313 Gm27618-201ENSMUST00000183671 60 ntBASIC14.04□□□□□ -0.16
Hoxc11P31313 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.04□□□□□ -0.16
Hoxc11P31313 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hoxc11P31313 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.04□□□□□ -0.16
Hoxc11P31313 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc11P31313 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hoxc11P31313 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hoxc11P31313 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Gm13223-201ENSMUST00000118609 747 ntBASIC14.03□□□□□ -0.16
Hoxc11P31313 Gm13015-201ENSMUST00000118674 204 ntBASIC14.03□□□□□ -0.16
Hoxc11P31313 Gm29541-201ENSMUST00000191351 678 ntBASIC14.03□□□□□ -0.16
Hoxc11P31313 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.03□□□□□ -0.16
Hoxc11P31313 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.03□□□□□ -0.16
Hoxc11P31313 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.03□□□□□ -0.16
Hoxc11P31313 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hoxc11P31313 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hoxc11P31313 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hoxc11P31313 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Hoxc11P31313 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc11P31313 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc11P31313 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc11P31313 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc11P31313 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc11P31313 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc11P31313 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc11P31313 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hoxc11P31313 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc11P31313 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hoxc11P31313 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.17
Hoxc11P31313 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms