Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdgfbP31240 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Gm5187-201ENSMUST00000117317 991 ntBASIC14.39□□□□□ -0.11
PdgfbP31240 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.39□□□□□ -0.11
PdgfbP31240 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.39□□□□□ -0.11
PdgfbP31240 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.39□□□□□ -0.11
PdgfbP31240 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.39□□□□□ -0.11
PdgfbP31240 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.39□□□□□ -0.11
PdgfbP31240 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.39□□□□□ -0.11
PdgfbP31240 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.39□□□□□ -0.11
PdgfbP31240 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.39□□□□□ -0.11
PdgfbP31240 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
PdgfbP31240 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.39□□□□□ -0.11
PdgfbP31240 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PdgfbP31240 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PdgfbP31240 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.39□□□□□ -0.11
PdgfbP31240 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PdgfbP31240 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.38□□□□□ -0.11
PdgfbP31240 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.38□□□□□ -0.11
PdgfbP31240 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.38□□□□□ -0.11
PdgfbP31240 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.38□□□□□ -0.11
PdgfbP31240 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.38□□□□□ -0.11
PdgfbP31240 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.38□□□□□ -0.11
PdgfbP31240 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.38□□□□□ -0.11
PdgfbP31240 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.38□□□□□ -0.11
PdgfbP31240 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PdgfbP31240 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.38□□□□□ -0.11
PdgfbP31240 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.38□□□□□ -0.11
PdgfbP31240 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.38□□□□□ -0.11
PdgfbP31240 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.38□□□□□ -0.11
PdgfbP31240 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PdgfbP31240 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfbP31240 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfbP31240 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.37□□□□□ -0.11
PdgfbP31240 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfbP31240 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfbP31240 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfbP31240 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfbP31240 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfbP31240 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.37□□□□□ -0.11
PdgfbP31240 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfbP31240 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfbP31240 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.37□□□□□ -0.11
PdgfbP31240 Gm15376-201ENSMUST00000122258 783 ntBASIC14.37□□□□□ -0.11
PdgfbP31240 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PdgfbP31240 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PdgfbP31240 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PdgfbP31240 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms