Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nckap1P28660 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nckap1P28660 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nckap1P28660 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.41□□□□□ -0.1
Nckap1P28660 Gm15487-201ENSMUST00000122373 465 ntBASIC14.41□□□□□ -0.1
Nckap1P28660 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Gm27631-201ENSMUST00000184163 466 ntBASIC14.41□□□□□ -0.1
Nckap1P28660 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Nckap1P28660 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nckap1P28660 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nckap1P28660 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nckap1P28660 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nckap1P28660 Syt7-204ENSMUST00000223586 1344 ntBASIC14.41□□□□□ -0.1
Nckap1P28660 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nckap1P28660 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Syt7-205ENSMUST00000224135 1557 ntBASIC14.4□□□□□ -0.1
Nckap1P28660 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.4□□□□□ -0.1
Nckap1P28660 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.4□□□□□ -0.1
Nckap1P28660 Gm16476-201ENSMUST00000221544 139 ntBASIC14.4□□□□□ -0.1
Nckap1P28660 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Nckap1P28660 Dupd1-202ENSMUST00000224735 548 ntBASIC14.4□□□□□ -0.1
Nckap1P28660 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.4□□□□□ -0.1
Nckap1P28660 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Nckap1P28660 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nckap1P28660 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nckap1P28660 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nckap1P28660 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nckap1P28660 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nckap1P28660 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.39□□□□□ -0.11
Nckap1P28660 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.39□□□□□ -0.11
Nckap1P28660 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Gm7488-201ENSMUST00000117148 684 ntBASIC14.39□□□□□ -0.11
Nckap1P28660 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Gm5745-201ENSMUST00000183748 313 ntBASIC14.39□□□□□ -0.11
Nckap1P28660 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nckap1P28660 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.39□□□□□ -0.11
Nckap1P28660 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms