Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BrafP28028 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BrafP28028 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BrafP28028 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.19□□□□□ -0.14
BrafP28028 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.19□□□□□ -0.14
BrafP28028 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BrafP28028 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BrafP28028 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BrafP28028 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.18□□□□□ -0.14
BrafP28028 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
BrafP28028 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.18□□□□□ -0.14
BrafP28028 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.18□□□□□ -0.14
BrafP28028 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
BrafP28028 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.18□□□□□ -0.14
BrafP28028 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
BrafP28028 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.18□□□□□ -0.14
BrafP28028 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.18□□□□□ -0.14
BrafP28028 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.18□□□□□ -0.14
BrafP28028 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
BrafP28028 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
BrafP28028 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.18□□□□□ -0.14
BrafP28028 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BrafP28028 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.17□□□□□ -0.14
BrafP28028 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.17□□□□□ -0.14
BrafP28028 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
BrafP28028 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.17□□□□□ -0.14
BrafP28028 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
BrafP28028 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.17□□□□□ -0.14
BrafP28028 Gm27300-201ENSMUST00000184085 97 ntBASIC14.17□□□□□ -0.14
BrafP28028 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.17□□□□□ -0.14
BrafP28028 Gm27335-201ENSMUST00000184758 97 ntBASIC14.17□□□□□ -0.14
BrafP28028 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.17□□□□□ -0.14
BrafP28028 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
BrafP28028 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
BrafP28028 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
BrafP28028 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
BrafP28028 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BrafP28028 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
BrafP28028 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
BrafP28028 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
BrafP28028 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.16□□□□□ -0.14
BrafP28028 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.16□□□□□ -0.14
BrafP28028 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.16□□□□□ -0.14
BrafP28028 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BrafP28028 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms