Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccl6P27784 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.31□□□□□ -0.6
Ccl6P27784 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccl6P27784 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.31□□□□□ -0.6
Ccl6P27784 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.31□□□□□ -0.6
Ccl6P27784 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Ccl6P27784 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.31□□□□□ -0.6
Ccl6P27784 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ccl6P27784 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccl6P27784 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccl6P27784 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Ccl6P27784 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccl6P27784 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccl6P27784 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.3□□□□□ -0.6
Ccl6P27784 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Ccl6P27784 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.3□□□□□ -0.6
Ccl6P27784 Gm6443-201ENSMUST00000203599 874 ntBASIC11.3□□□□□ -0.6
Ccl6P27784 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Ccl6P27784 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Ccl6P27784 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ccl6P27784 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Ccl6P27784 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.3□□□□□ -0.6
Ccl6P27784 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccl6P27784 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccl6P27784 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccl6P27784 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccl6P27784 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccl6P27784 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccl6P27784 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccl6P27784 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccl6P27784 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Acot6-202ENSMUST00000222921 3622 ntBASIC11.29□□□□□ -0.6
Ccl6P27784 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.29□□□□□ -0.6
Ccl6P27784 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Ccl6P27784 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.29□□□□□ -0.6
Ccl6P27784 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl6P27784 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms