Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6bP23440 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6bP23440 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6bP23440 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pde6bP23440 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6bP23440 Gm24543-201ENSMUST00000103867 82 ntBASIC15.82■□□□□ 0.12
Pde6bP23440 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6bP23440 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.82■□□□□ 0.12
Pde6bP23440 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Pde6bP23440 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Pde6bP23440 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6bP23440 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6bP23440 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6bP23440 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.82■□□□□ 0.12
Pde6bP23440 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6bP23440 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Gm14719-201ENSMUST00000121891 340 ntBASIC15.81■□□□□ 0.12
Pde6bP23440 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.81■□□□□ 0.12
Pde6bP23440 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pde6bP23440 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pde6bP23440 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.81■□□□□ 0.12
Pde6bP23440 Gm7775-201ENSMUST00000218871 853 ntBASIC15.81■□□□□ 0.12
Pde6bP23440 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.81■□□□□ 0.12
Pde6bP23440 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.81■□□□□ 0.12
Pde6bP23440 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pde6bP23440 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6bP23440 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pde6bP23440 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Pde6bP23440 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.8■□□□□ 0.12
Pde6bP23440 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Pde6bP23440 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
Pde6bP23440 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.8■□□□□ 0.12
Pde6bP23440 Gm15487-201ENSMUST00000122373 465 ntBASIC15.8■□□□□ 0.12
Pde6bP23440 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Gm27838-201ENSMUST00000184829 128 ntBASIC15.8■□□□□ 0.12
Pde6bP23440 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pde6bP23440 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pde6bP23440 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6bP23440 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pde6bP23440 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.79■□□□□ 0.12
Pde6bP23440 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.79■□□□□ 0.12
Pde6bP23440 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Pde6bP23440 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Pde6bP23440 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pde6bP23440 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.79■□□□□ 0.12
Pde6bP23440 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 Gm16215-201ENSMUST00000161990 637 ntBASIC15.79■□□□□ 0.12
Pde6bP23440 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.79■□□□□ 0.12
Pde6bP23440 Gm45098-201ENSMUST00000207179 657 ntBASIC15.79■□□□□ 0.12
Pde6bP23440 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pde6bP23440 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pde6bP23440 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6bP23440 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms