Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.01□□□□□ -0.17
Fv4P11370 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Fv4P11370 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.01□□□□□ -0.17
Fv4P11370 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Fv4P11370 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fv4P11370 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14□□□□□ -0.17
Fv4P11370 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14□□□□□ -0.17
Fv4P11370 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14□□□□□ -0.17
Fv4P11370 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14□□□□□ -0.17
Fv4P11370 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14□□□□□ -0.17
Fv4P11370 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Fv4P11370 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Gm9385-201ENSMUST00000117563 472 ntBASIC14□□□□□ -0.17
Fv4P11370 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Fv4P11370 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Fv4P11370 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Fv4P11370 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14□□□□□ -0.17
Fv4P11370 Gm45747-201ENSMUST00000212203 999 ntBASIC14□□□□□ -0.17
Fv4P11370 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 AC159295.1-201ENSMUST00000225326 940 ntBASIC14□□□□□ -0.17
Fv4P11370 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Fv4P11370 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Fv4P11370 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Fv4P11370 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Fv4P11370 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14□□□□□ -0.17
Fv4P11370 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Fv4P11370 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Fv4P11370 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Fv4P11370 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 Gm5479-201ENSMUST00000160578 435 ntBASIC13.99□□□□□ -0.17
Fv4P11370 Gm18733-201ENSMUST00000173950 856 ntBASIC13.99□□□□□ -0.17
Fv4P11370 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.99□□□□□ -0.17
Fv4P11370 Gm17968-201ENSMUST00000194902 784 ntBASIC13.99□□□□□ -0.17
Fv4P11370 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Fv4P11370 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.99□□□□□ -0.17
Fv4P11370 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Fv4P11370 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
Fv4P11370 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fv4P11370 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Fv4P11370 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.98□□□□□ -0.17
Fv4P11370 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.98□□□□□ -0.17
Fv4P11370 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.98□□□□□ -0.17
Fv4P11370 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Fv4P11370 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.98□□□□□ -0.17
Fv4P11370 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.98□□□□□ -0.17
Fv4P11370 Psmb5-202ENSMUST00000227257 622 ntBASIC13.98□□□□□ -0.17
Fv4P11370 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms