Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Ccl3P10855 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.74□□□□□ -0.37
Ccl3P10855 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccl3P10855 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Gm15678-201ENSMUST00000117573 960 ntBASIC12.74□□□□□ -0.37
Ccl3P10855 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Ccl3P10855 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccl3P10855 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ccl3P10855 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ccl3P10855 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ccl3P10855 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccl3P10855 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl3P10855 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccl3P10855 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccl3P10855 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ccl3P10855 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Gm15957-201ENSMUST00000118893 974 ntBASIC12.73□□□□□ -0.37
Ccl3P10855 Gm12882-201ENSMUST00000121696 517 ntBASIC12.73□□□□□ -0.37
Ccl3P10855 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccl3P10855 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ccl3P10855 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccl3P10855 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccl3P10855 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.73□□□□□ -0.37
Ccl3P10855 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccl3P10855 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.73□□□□□ -0.37
Ccl3P10855 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccl3P10855 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl3P10855 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccl3P10855 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.72□□□□□ -0.37
Ccl3P10855 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.72□□□□□ -0.37
Ccl3P10855 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ccl3P10855 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccl3P10855 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.72□□□□□ -0.37
Ccl3P10855 Gm5279-201ENSMUST00000199575 745 ntBASIC12.72□□□□□ -0.37
Ccl3P10855 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Gm17795-201ENSMUST00000214505 757 ntBASIC12.72□□□□□ -0.37
Ccl3P10855 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.72□□□□□ -0.37
Ccl3P10855 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccl3P10855 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccl3P10855 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms