Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Polr2aP08775 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.24■□□□□ 0.19
Polr2aP08775 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Polr2aP08775 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.24■□□□□ 0.19
Polr2aP08775 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Polr2aP08775 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Polr2aP08775 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Polr2aP08775 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Polr2aP08775 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Polr2aP08775 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Polr2aP08775 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.23■□□□□ 0.19
Polr2aP08775 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Polr2aP08775 Mir686-201ENSMUST00000102174 109 ntBASIC16.23■□□□□ 0.19
Polr2aP08775 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Polr2aP08775 Mir3547-201ENSMUST00000175461 88 ntBASIC16.23■□□□□ 0.19
Polr2aP08775 Gm7584-201ENSMUST00000175829 940 ntBASIC16.23■□□□□ 0.19
Polr2aP08775 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.23■□□□□ 0.19
Polr2aP08775 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.23■□□□□ 0.19
Polr2aP08775 Gm43822-201ENSMUST00000200285 476 ntBASIC16.23■□□□□ 0.19
Polr2aP08775 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Polr2aP08775 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Polr2aP08775 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Polr2aP08775 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
Polr2aP08775 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Polr2aP08775 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Polr2aP08775 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Polr2aP08775 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Polr2aP08775 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Polr2aP08775 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.22■□□□□ 0.19
Polr2aP08775 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2aP08775 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2aP08775 Gm7783-201ENSMUST00000204795 781 ntBASIC16.22■□□□□ 0.19
Polr2aP08775 Gm18056-201ENSMUST00000207670 568 ntBASIC16.22■□□□□ 0.19
Polr2aP08775 Gm18061-201ENSMUST00000208350 562 ntBASIC16.22■□□□□ 0.19
Polr2aP08775 Gm18063-201ENSMUST00000208529 568 ntBASIC16.22■□□□□ 0.19
Polr2aP08775 Gm18052-201ENSMUST00000208750 559 ntBASIC16.22■□□□□ 0.19
Polr2aP08775 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2aP08775 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2aP08775 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2aP08775 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.22■□□□□ 0.19
Polr2aP08775 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.22■□□□□ 0.19
Polr2aP08775 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.22■□□□□ 0.19
Polr2aP08775 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2aP08775 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2aP08775 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.22■□□□□ 0.19
Polr2aP08775 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Polr2aP08775 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2aP08775 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.22■□□□□ 0.19
Polr2aP08775 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Polr2aP08775 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2aP08775 Mir7070-201ENSMUST00000183657 86 ntBASIC16.22■□□□□ 0.19
Polr2aP08775 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC16.22■□□□□ 0.19
Polr2aP08775 Gm4857-201ENSMUST00000192718 785 ntBASIC16.22■□□□□ 0.19
Polr2aP08775 Gm29705-201ENSMUST00000212598 474 ntBASIC16.22■□□□□ 0.19
Polr2aP08775 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2aP08775 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Polr2aP08775 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Polr2aP08775 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2aP08775 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2aP08775 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2aP08775 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2aP08775 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2aP08775 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2aP08775 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2aP08775 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2aP08775 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2aP08775 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2aP08775 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2aP08775 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.21■□□□□ 0.19
Polr2aP08775 Gm8706-201ENSMUST00000197372 1491 ntBASIC16.21■□□□□ 0.19
Polr2aP08775 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2aP08775 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.21■□□□□ 0.19
Polr2aP08775 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.21■□□□□ 0.19
Polr2aP08775 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2aP08775 Gm8927-201ENSMUST00000181978 981 ntBASIC16.21■□□□□ 0.19
Polr2aP08775 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2aP08775 Gm3222-201ENSMUST00000071282 990 ntBASIC16.21■□□□□ 0.19
Polr2aP08775 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.21■□□□□ 0.19
Polr2aP08775 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.21■□□□□ 0.19
Polr2aP08775 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Polr2aP08775 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2aP08775 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2aP08775 BC037039-201ENSMUST00000192003 2205 ntBASIC16.21■□□□□ 0.18
Polr2aP08775 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
Polr2aP08775 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Polr2aP08775 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Polr2aP08775 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
Polr2aP08775 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Polr2aP08775 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Polr2aP08775 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2aP08775 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.2■□□□□ 0.18
Polr2aP08775 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2aP08775 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.2■□□□□ 0.18
Polr2aP08775 Gm17823-201ENSMUST00000217830 1006 ntBASIC16.2■□□□□ 0.18
Polr2aP08775 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2aP08775 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2aP08775 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2aP08775 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2aP08775 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Polr2aP08775 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms