Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna1P04756 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.52■□□□□ 0.08
Chrna1P04756 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Chrna1P04756 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna1P04756 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna1P04756 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Chrna1P04756 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Chrna1P04756 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Chrna1P04756 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Chrna1P04756 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.52■□□□□ 0.08
Chrna1P04756 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna1P04756 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna1P04756 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Chrna1P04756 Gm42612-201ENSMUST00000197986 623 ntBASIC15.52■□□□□ 0.08
Chrna1P04756 Gm43170-201ENSMUST00000199827 612 ntBASIC15.52■□□□□ 0.08
Chrna1P04756 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.52■□□□□ 0.08
Chrna1P04756 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna1P04756 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.52■□□□□ 0.08
Chrna1P04756 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna1P04756 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna1P04756 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna1P04756 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna1P04756 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna1P04756 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna1P04756 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna1P04756 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna1P04756 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna1P04756 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna1P04756 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna1P04756 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna1P04756 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna1P04756 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna1P04756 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Chrna1P04756 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna1P04756 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna1P04756 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna1P04756 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna1P04756 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna1P04756 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Chrna1P04756 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna1P04756 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Chrna1P04756 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.51■□□□□ 0.07
Chrna1P04756 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Chrna1P04756 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna1P04756 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Chrna1P04756 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.51■□□□□ 0.07
Chrna1P04756 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna1P04756 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna1P04756 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna1P04756 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna1P04756 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna1P04756 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chrna1P04756 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Gm12859-201ENSMUST00000117834 427 ntBASIC15.5■□□□□ 0.07
Chrna1P04756 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.5■□□□□ 0.07
Chrna1P04756 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.5■□□□□ 0.07
Chrna1P04756 Gm33320-201ENSMUST00000192232 530 ntBASIC15.5■□□□□ 0.07
Chrna1P04756 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.5■□□□□ 0.07
Chrna1P04756 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.5■□□□□ 0.07
Chrna1P04756 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Chrna1P04756 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna1P04756 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Chrna1P04756 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Chrna1P04756 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.49■□□□□ 0.07
Chrna1P04756 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Chrna1P04756 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Gm15460-201ENSMUST00000118147 391 ntBASIC15.49■□□□□ 0.07
Chrna1P04756 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.49■□□□□ 0.07
Chrna1P04756 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.49■□□□□ 0.07
Chrna1P04756 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna1P04756 Gm21854-201ENSMUST00000179901 471 ntBASIC15.49■□□□□ 0.07
Chrna1P04756 Gm5745-201ENSMUST00000183748 313 ntBASIC15.49■□□□□ 0.07
Chrna1P04756 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.49■□□□□ 0.07
Chrna1P04756 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms