Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CfdP03953 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CfdP03953 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CfdP03953 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CfdP03953 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CfdP03953 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.1□□□□□ -0.47
CfdP03953 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.1□□□□□ -0.47
CfdP03953 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.1□□□□□ -0.47
CfdP03953 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CfdP03953 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.1□□□□□ -0.47
CfdP03953 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.1□□□□□ -0.47
CfdP03953 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CfdP03953 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CfdP03953 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CfdP03953 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.09□□□□□ -0.47
CfdP03953 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.09□□□□□ -0.47
CfdP03953 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.09□□□□□ -0.47
CfdP03953 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CfdP03953 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
CfdP03953 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CfdP03953 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.09□□□□□ -0.47
CfdP03953 Gm15372-201ENSMUST00000120729 834 ntBASIC12.09□□□□□ -0.47
CfdP03953 Gm18489-201ENSMUST00000172565 551 ntBASIC12.09□□□□□ -0.47
CfdP03953 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.09□□□□□ -0.47
CfdP03953 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.09□□□□□ -0.47
CfdP03953 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.09□□□□□ -0.47
CfdP03953 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.09□□□□□ -0.47
CfdP03953 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.09□□□□□ -0.47
CfdP03953 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
CfdP03953 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.09□□□□□ -0.47
CfdP03953 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.09□□□□□ -0.47
CfdP03953 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.09□□□□□ -0.47
CfdP03953 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
CfdP03953 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CfdP03953 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CfdP03953 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms