Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CcnkO88874 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnkO88874 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CcnkO88874 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnkO88874 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnkO88874 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnkO88874 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnkO88874 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnkO88874 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnkO88874 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CcnkO88874 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnkO88874 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcnkO88874 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CcnkO88874 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.93□□□□□ -0.34
CcnkO88874 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CcnkO88874 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
CcnkO88874 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.92□□□□□ -0.34
CcnkO88874 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Gm25990-201ENSMUST00000102440 86 ntBASIC12.92□□□□□ -0.34
CcnkO88874 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CcnkO88874 Gm7153-201ENSMUST00000117092 455 ntBASIC12.92□□□□□ -0.34
CcnkO88874 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.92□□□□□ -0.34
CcnkO88874 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.92□□□□□ -0.34
CcnkO88874 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CcnkO88874 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Grk6-207ENSMUST00000225925 2769 ntBASIC12.92□□□□□ -0.34
CcnkO88874 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
CcnkO88874 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CcnkO88874 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.92□□□□□ -0.34
CcnkO88874 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CcnkO88874 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CcnkO88874 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.91□□□□□ -0.34
CcnkO88874 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
CcnkO88874 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.91□□□□□ -0.34
CcnkO88874 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.91□□□□□ -0.34
CcnkO88874 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.91□□□□□ -0.34
CcnkO88874 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.91□□□□□ -0.34
CcnkO88874 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.91□□□□□ -0.34
CcnkO88874 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.91□□□□□ -0.34
CcnkO88874 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.91□□□□□ -0.34
CcnkO88874 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.91□□□□□ -0.34
CcnkO88874 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CcnkO88874 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CcnkO88874 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CcnkO88874 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CcnkO88874 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcnkO88874 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CcnkO88874 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CcnkO88874 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CcnkO88874 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CcnkO88874 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CcnkO88874 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CcnkO88874 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CcnkO88874 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CcnkO88874 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CcnkO88874 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
CcnkO88874 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.9□□□□□ -0.34
CcnkO88874 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms