Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ClppO88696 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.18□□□□□ -0.14
ClppO88696 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.18□□□□□ -0.14
ClppO88696 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ClppO88696 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 Gm2810-201ENSMUST00000118681 990 ntBASIC14.18□□□□□ -0.14
ClppO88696 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
ClppO88696 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.18□□□□□ -0.14
ClppO88696 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ClppO88696 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ClppO88696 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.17□□□□□ -0.14
ClppO88696 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ClppO88696 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.17□□□□□ -0.14
ClppO88696 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Carlr-201ENSMUST00000181515 2574 ntBASIC14.17□□□□□ -0.14
ClppO88696 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ClppO88696 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Gm22175-201ENSMUST00000175007 78 ntBASIC14.17□□□□□ -0.14
ClppO88696 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.17□□□□□ -0.14
ClppO88696 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.17□□□□□ -0.14
ClppO88696 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
ClppO88696 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClppO88696 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
ClppO88696 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.16□□□□□ -0.14
ClppO88696 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
ClppO88696 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ClppO88696 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ClppO88696 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.16□□□□□ -0.14
ClppO88696 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.16□□□□□ -0.14
ClppO88696 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
ClppO88696 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.16□□□□□ -0.14
ClppO88696 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ClppO88696 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.16□□□□□ -0.14
ClppO88696 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.16□□□□□ -0.14
ClppO88696 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.16□□□□□ -0.14
ClppO88696 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ClppO88696 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClppO88696 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
ClppO88696 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms