Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Mir770-201ENSMUST00000103252 94 ntBASIC11.42□□□□□ -0.58
Pde6dO55057 Gm13168-201ENSMUST00000121771 632 ntBASIC11.42□□□□□ -0.58
Pde6dO55057 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.42□□□□□ -0.58
Pde6dO55057 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.42□□□□□ -0.58
Pde6dO55057 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.42□□□□□ -0.58
Pde6dO55057 Gm18622-201ENSMUST00000219361 595 ntBASIC11.42□□□□□ -0.58
Pde6dO55057 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
Pde6dO55057 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.42□□□□□ -0.58
Pde6dO55057 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.42□□□□□ -0.58
Pde6dO55057 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pde6dO55057 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Pde6dO55057 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Pde6dO55057 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pde6dO55057 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pde6dO55057 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pde6dO55057 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pde6dO55057 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.41□□□□□ -0.58
Pde6dO55057 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Pde6dO55057 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.41□□□□□ -0.58
Pde6dO55057 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Gm25925-201ENSMUST00000158314 306 ntBASIC11.41□□□□□ -0.58
Pde6dO55057 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.41□□□□□ -0.58
Pde6dO55057 Gm18959-201ENSMUST00000208954 655 ntBASIC11.41□□□□□ -0.58
Pde6dO55057 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.41□□□□□ -0.58
Pde6dO55057 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.41□□□□□ -0.58
Pde6dO55057 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.41□□□□□ -0.58
Pde6dO55057 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pde6dO55057 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.41□□□□□ -0.58
Pde6dO55057 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Acot6-202ENSMUST00000222921 3622 ntBASIC11.41□□□□□ -0.58
Pde6dO55057 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pde6dO55057 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Pde6dO55057 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pde6dO55057 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
Pde6dO55057 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.4□□□□□ -0.58
Pde6dO55057 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Pde6dO55057 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.4□□□□□ -0.58
Pde6dO55057 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.4□□□□□ -0.58
Pde6dO55057 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pde6dO55057 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.4□□□□□ -0.58
Pde6dO55057 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pde6dO55057 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.4□□□□□ -0.58
Pde6dO55057 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.4□□□□□ -0.58
Pde6dO55057 Gm13436-201ENSMUST00000120418 567 ntBASIC11.4□□□□□ -0.58
Pde6dO55057 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.4□□□□□ -0.58
Pde6dO55057 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.4□□□□□ -0.58
Pde6dO55057 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms