Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Copb2O55029 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Copb2O55029 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Copb2O55029 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Copb2O55029 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Copb2O55029 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Copb2O55029 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Copb2O55029 Gm14719-201ENSMUST00000121891 340 ntBASIC16.64■□□□□ 0.25
Copb2O55029 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Copb2O55029 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Copb2O55029 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Copb2O55029 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.64■□□□□ 0.25
Copb2O55029 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Copb2O55029 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Copb2O55029 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Copb2O55029 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.64■□□□□ 0.25
Copb2O55029 Gm45453-201ENSMUST00000211758 853 ntBASIC16.64■□□□□ 0.25
Copb2O55029 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.64■□□□□ 0.25
Copb2O55029 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Copb2O55029 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Copb2O55029 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Copb2O55029 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Copb2O55029 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Copb2O55029 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.64■□□□□ 0.25
Copb2O55029 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Copb2O55029 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.64■□□□□ 0.25
Copb2O55029 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Copb2O55029 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Copb2O55029 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Copb2O55029 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Copb2O55029 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Copb2O55029 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Copb2O55029 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.63■□□□□ 0.25
Copb2O55029 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Copb2O55029 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Copb2O55029 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Copb2O55029 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Copb2O55029 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Copb2O55029 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Copb2O55029 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Copb2O55029 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.63■□□□□ 0.25
Copb2O55029 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Copb2O55029 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Copb2O55029 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Copb2O55029 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Copb2O55029 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Copb2O55029 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Copb2O55029 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.62■□□□□ 0.25
Copb2O55029 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.62■□□□□ 0.25
Copb2O55029 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.62■□□□□ 0.25
Copb2O55029 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.62■□□□□ 0.25
Copb2O55029 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Copb2O55029 Gm43703-201ENSMUST00000200523 763 ntBASIC16.62■□□□□ 0.25
Copb2O55029 Gm44855-201ENSMUST00000205725 362 ntBASIC16.62■□□□□ 0.25
Copb2O55029 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.62■□□□□ 0.25
Copb2O55029 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Copb2O55029 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Copb2O55029 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Syt7-204ENSMUST00000223586 1344 ntBASIC16.62■□□□□ 0.25
Copb2O55029 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Copb2O55029 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Copb2O55029 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Copb2O55029 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Copb2O55029 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Copb2O55029 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Copb2O55029 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Copb2O55029 Gm7730-201ENSMUST00000212486 454 ntBASIC16.61■□□□□ 0.25
Copb2O55029 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Copb2O55029 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Copb2O55029 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.61■□□□□ 0.25
Copb2O55029 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Copb2O55029 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Copb2O55029 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Copb2O55029 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.61■□□□□ 0.25
Copb2O55029 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Copb2O55029 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Copb2O55029 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Copb2O55029 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Copb2O55029 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Copb2O55029 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms