Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.23■□□□□ 0.35
Smarce1O54941 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.23■□□□□ 0.35
Smarce1O54941 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smarce1O54941 Gm15590-201ENSMUST00000078419 552 ntBASIC17.23■□□□□ 0.35
Smarce1O54941 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.23■□□□□ 0.35
Smarce1O54941 Gm10154-201ENSMUST00000084445 354 ntBASIC17.23■□□□□ 0.35
Smarce1O54941 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.23■□□□□ 0.35
Smarce1O54941 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.23■□□□□ 0.35
Smarce1O54941 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarce1O54941 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Smarce1O54941 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.22■□□□□ 0.35
Smarce1O54941 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.22■□□□□ 0.35
Smarce1O54941 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Gm13884-201ENSMUST00000118103 829 ntBASIC17.22■□□□□ 0.35
Smarce1O54941 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.22■□□□□ 0.35
Smarce1O54941 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.22■□□□□ 0.35
Smarce1O54941 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.22■□□□□ 0.35
Smarce1O54941 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.22■□□□□ 0.35
Smarce1O54941 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smarce1O54941 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.22■□□□□ 0.35
Smarce1O54941 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smarce1O54941 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarce1O54941 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smarce1O54941 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Smarce1O54941 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarce1O54941 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Smarce1O54941 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Smarce1O54941 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarce1O54941 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.21■□□□□ 0.35
Smarce1O54941 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.21■□□□□ 0.35
Smarce1O54941 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Smarce1O54941 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smarce1O54941 Gm5864-201ENSMUST00000202263 970 ntBASIC17.21■□□□□ 0.35
Smarce1O54941 Gm18195-201ENSMUST00000207604 706 ntBASIC17.21■□□□□ 0.35
Smarce1O54941 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarce1O54941 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarce1O54941 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.21■□□□□ 0.35
Smarce1O54941 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.21■□□□□ 0.35
Smarce1O54941 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
Smarce1O54941 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Smarce1O54941 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Smarce1O54941 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Smarce1O54941 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Smarce1O54941 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.2■□□□□ 0.34
Smarce1O54941 Mir5126-201ENSMUST00000175513 77 ntBASIC17.2■□□□□ 0.34
Smarce1O54941 Gm27628-201ENSMUST00000184911 107 ntBASIC17.2■□□□□ 0.34
Smarce1O54941 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.2■□□□□ 0.34
Smarce1O54941 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.2■□□□□ 0.34
Smarce1O54941 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Smarce1O54941 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Smarce1O54941 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Smarce1O54941 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Smarce1O54941 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarce1O54941 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarce1O54941 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarce1O54941 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarce1O54941 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Smarce1O54941 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms