Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.56■□□□□ 0.08
Nr1i3O35627 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nr1i3O35627 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nr1i3O35627 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nr1i3O35627 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Nr1i3O35627 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nr1i3O35627 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.56■□□□□ 0.08
Nr1i3O35627 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.56■□□□□ 0.08
Nr1i3O35627 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nr1i3O35627 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Nr1i3O35627 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Nr1i3O35627 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Nr1i3O35627 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Nr1i3O35627 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.55■□□□□ 0.08
Nr1i3O35627 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.55■□□□□ 0.08
Nr1i3O35627 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.55■□□□□ 0.08
Nr1i3O35627 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.55■□□□□ 0.08
Nr1i3O35627 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Nr1i3O35627 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nr1i3O35627 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.55■□□□□ 0.08
Nr1i3O35627 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.54■□□□□ 0.08
Nr1i3O35627 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Nr1i3O35627 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Nr1i3O35627 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.54■□□□□ 0.08
Nr1i3O35627 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.54■□□□□ 0.08
Nr1i3O35627 Gm15483-201ENSMUST00000120338 456 ntBASIC15.54■□□□□ 0.08
Nr1i3O35627 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.54■□□□□ 0.08
Nr1i3O35627 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Nr1i3O35627 Rpph1-201ENSMUST00000175096 319 ntBASIC15.54■□□□□ 0.08
Nr1i3O35627 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.54■□□□□ 0.08
Nr1i3O35627 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Nr1i3O35627 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nr1i3O35627 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.53■□□□□ 0.08
Nr1i3O35627 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.53■□□□□ 0.08
Nr1i3O35627 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Nr1i3O35627 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Nr1i3O35627 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nr1i3O35627 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nr1i3O35627 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nr1i3O35627 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Nr1i3O35627 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms