Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Npc1O35604 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Npc1O35604 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Npc1O35604 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Npc1O35604 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Npc1O35604 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Npc1O35604 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Npc1O35604 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Npc1O35604 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Npc1O35604 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Npc1O35604 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Npc1O35604 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Npc1O35604 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Npc1O35604 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Npc1O35604 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Npc1O35604 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Npc1O35604 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Npc1O35604 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.16□□□□□ -0.14
Npc1O35604 Gm13616-201ENSMUST00000120600 222 ntBASIC14.16□□□□□ -0.14
Npc1O35604 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.16□□□□□ -0.14
Npc1O35604 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Npc1O35604 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Npc1O35604 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.16□□□□□ -0.14
Npc1O35604 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.16□□□□□ -0.14
Npc1O35604 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Npc1O35604 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Npc1O35604 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Npc1O35604 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Npc1O35604 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Npc1O35604 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Npc1O35604 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Npc1O35604 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Npc1O35604 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Npc1O35604 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.15□□□□□ -0.14
Npc1O35604 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Npc1O35604 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Gm13464-201ENSMUST00000119418 935 ntBASIC14.15□□□□□ -0.14
Npc1O35604 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.15□□□□□ -0.14
Npc1O35604 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.15□□□□□ -0.14
Npc1O35604 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Npc1O35604 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Npc1O35604 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Npc1O35604 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Carlr-201ENSMUST00000181515 2574 ntBASIC14.15□□□□□ -0.14
Npc1O35604 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Npc1O35604 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Npc1O35604 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.14□□□□□ -0.15
Npc1O35604 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.14□□□□□ -0.15
Npc1O35604 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.14□□□□□ -0.15
Npc1O35604 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Npc1O35604 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.14□□□□□ -0.15
Npc1O35604 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.14□□□□□ -0.15
Npc1O35604 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.14□□□□□ -0.15
Npc1O35604 Gm18049-201ENSMUST00000208909 581 ntBASIC14.14□□□□□ -0.15
Npc1O35604 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.14□□□□□ -0.15
Npc1O35604 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Npc1O35604 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Npc1O35604 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms