Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ScaperF8VQ70 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ScaperF8VQ70 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ScaperF8VQ70 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
ScaperF8VQ70 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ScaperF8VQ70 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Efs-202ENSMUST00000227037 2540 ntBASIC18.34■□□□□ 0.53
ScaperF8VQ70 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.34■□□□□ 0.53
ScaperF8VQ70 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ScaperF8VQ70 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Gm17150-201ENSMUST00000165577 381 ntBASIC18.33■□□□□ 0.53
ScaperF8VQ70 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.33■□□□□ 0.53
ScaperF8VQ70 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Dupd1-202ENSMUST00000224735 548 ntBASIC18.33■□□□□ 0.53
ScaperF8VQ70 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Rassf8-202ENSMUST00000058538 1131 ntBASIC18.33■□□□□ 0.53
ScaperF8VQ70 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ScaperF8VQ70 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ScaperF8VQ70 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.33■□□□□ 0.53
ScaperF8VQ70 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ScaperF8VQ70 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ScaperF8VQ70 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ScaperF8VQ70 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ScaperF8VQ70 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ScaperF8VQ70 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ScaperF8VQ70 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ScaperF8VQ70 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
ScaperF8VQ70 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ScaperF8VQ70 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ScaperF8VQ70 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Gm8749-201ENSMUST00000117737 331 ntBASIC18.32■□□□□ 0.52
ScaperF8VQ70 Gm11918-201ENSMUST00000121660 179 ntBASIC18.32■□□□□ 0.52
ScaperF8VQ70 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.32■□□□□ 0.52
ScaperF8VQ70 Gm9522-201ENSMUST00000182394 926 ntBASIC18.32■□□□□ 0.52
ScaperF8VQ70 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Gm2451-201ENSMUST00000199447 999 ntBASIC18.32■□□□□ 0.52
ScaperF8VQ70 Gm10290-201ENSMUST00000200451 999 ntBASIC18.32■□□□□ 0.52
ScaperF8VQ70 Gm18624-201ENSMUST00000220966 658 ntBASIC18.32■□□□□ 0.52
ScaperF8VQ70 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.32■□□□□ 0.52
ScaperF8VQ70 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ScaperF8VQ70 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ScaperF8VQ70 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ScaperF8VQ70 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ScaperF8VQ70 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms