Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ube4aE9Q735 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ube4aE9Q735 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ube4aE9Q735 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ube4aE9Q735 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ube4aE9Q735 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ube4aE9Q735 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Ube4aE9Q735 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ube4aE9Q735 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.33■□□□□ 0.37
Ube4aE9Q735 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ube4aE9Q735 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.33■□□□□ 0.37
Ube4aE9Q735 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ube4aE9Q735 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.33■□□□□ 0.36
Ube4aE9Q735 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.33■□□□□ 0.36
Ube4aE9Q735 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.33■□□□□ 0.36
Ube4aE9Q735 Gm45384-201ENSMUST00000210451 277 ntBASIC17.33■□□□□ 0.36
Ube4aE9Q735 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.33■□□□□ 0.36
Ube4aE9Q735 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.33■□□□□ 0.36
Ube4aE9Q735 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.33■□□□□ 0.36
Ube4aE9Q735 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4aE9Q735 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4aE9Q735 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4aE9Q735 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4aE9Q735 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4aE9Q735 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4aE9Q735 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ube4aE9Q735 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.33■□□□□ 0.36
Ube4aE9Q735 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.32■□□□□ 0.36
Ube4aE9Q735 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Gm5354-201ENSMUST00000182417 973 ntBASIC17.32■□□□□ 0.36
Ube4aE9Q735 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.32■□□□□ 0.36
Ube4aE9Q735 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.32■□□□□ 0.36
Ube4aE9Q735 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.32■□□□□ 0.36
Ube4aE9Q735 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.32■□□□□ 0.36
Ube4aE9Q735 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ube4aE9Q735 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.31■□□□□ 0.36
Ube4aE9Q735 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.31■□□□□ 0.36
Ube4aE9Q735 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Gm18187-201ENSMUST00000196476 984 ntBASIC17.31■□□□□ 0.36
Ube4aE9Q735 AC155286.1-201ENSMUST00000218632 448 ntBASIC17.31■□□□□ 0.36
Ube4aE9Q735 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ube4aE9Q735 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ube4aE9Q735 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Ube4aE9Q735 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4aE9Q735 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ube4aE9Q735 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4aE9Q735 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4aE9Q735 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4aE9Q735 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ube4aE9Q735 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4aE9Q735 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ube4aE9Q735 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Ube4aE9Q735 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms