Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Gm44344-201ENSMUST00000200287 129 ntBASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Mir125a-201ENSMUST00000083545 68 ntBASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb9E9Q5G2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb9E9Q5G2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb9E9Q5G2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Pcdhb9E9Q5G2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb9E9Q5G2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb9E9Q5G2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb9E9Q5G2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Gm27321-201ENSMUST00000185021 205 ntBASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Gm7775-201ENSMUST00000218871 853 ntBASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb9E9Q5G2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Gm27989-201ENSMUST00000184721 107 ntBASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 AC102291.3-201ENSMUST00000226566 405 ntBASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb9E9Q5G2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Gm15653-201ENSMUST00000119247 907 ntBASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Gm12151-201ENSMUST00000121374 290 ntBASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb9E9Q5G2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms