Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh17E9PXF0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh17E9PXF0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh17E9PXF0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh17E9PXF0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh17E9PXF0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh17E9PXF0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh17E9PXF0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh17E9PXF0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh17E9PXF0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh17E9PXF0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh17E9PXF0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh17E9PXF0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Gm27437-201ENSMUST00000183429 107 ntBASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Mir8102-201ENSMUST00000184148 139 ntBASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Gm27989-201ENSMUST00000184721 107 ntBASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh17E9PXF0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh17E9PXF0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Mir7684-201ENSMUST00000183858 60 ntBASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh17E9PXF0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms