Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm25545-201ENSMUST00000122673 323 ntBASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Gm23699-201ENSMUST00000158835 135 ntBASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a3E9PWQ3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Gm42779-201ENSMUST00000198807 406 ntBASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a3E9PWQ3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a3E9PWQ3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Gm8365-201ENSMUST00000197334 648 ntBASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Col6a3E9PWQ3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms