Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28043E0CXC2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Gm28043E0CXC2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28043E0CXC2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 149.8 ms