Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hfm1D3Z4R1 BC037039-201ENSMUST00000192003 2205 ntBASIC20.02■□□□□ 0.79
Hfm1D3Z4R1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hfm1D3Z4R1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Hfm1D3Z4R1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC20.02■□□□□ 0.79
Hfm1D3Z4R1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Hfm1D3Z4R1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Hfm1D3Z4R1 Gm4971-201ENSMUST00000205991 1108 ntBASIC20.02■□□□□ 0.79
Hfm1D3Z4R1 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Hfm1D3Z4R1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hfm1D3Z4R1 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC20.02■□□□□ 0.79
Hfm1D3Z4R1 Gm17383-201ENSMUST00000078739 1041 ntBASIC20.02■□□□□ 0.79
Hfm1D3Z4R1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Gm22018-201ENSMUST00000104357 131 ntBASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Gm2639-201ENSMUST00000156881 1297 ntBASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Mir3102-201ENSMUST00000175555 104 ntBASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Gm5069-202ENSMUST00000192714 1011 ntBASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Gm38002-201ENSMUST00000193255 180 ntBASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
Hfm1D3Z4R1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Gm13034-201ENSMUST00000121342 3177 ntBASIC20■□□□□ 0.79
Hfm1D3Z4R1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Gm9109-201ENSMUST00000120254 1405 ntBASIC20■□□□□ 0.79
Hfm1D3Z4R1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Gm6152-201ENSMUST00000151704 340 ntBASIC20■□□□□ 0.79
Hfm1D3Z4R1 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hfm1D3Z4R1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Gm8213-201ENSMUST00000118191 441 ntBASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Gm10156-201ENSMUST00000122364 462 ntBASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Gm14730-201ENSMUST00000122378 1045 ntBASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Gm7498-201ENSMUST00000203282 1084 ntBASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hfm1D3Z4R1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Gm10327-201ENSMUST00000105222 1002 ntBASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hfm1D3Z4R1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms