Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Shank1D3YZU1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.96□□□□□ -0.33
Shank1D3YZU1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.96□□□□□ -0.33
Shank1D3YZU1 Gm5354-201ENSMUST00000182417 973 ntBASIC12.96□□□□□ -0.33
Shank1D3YZU1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.96□□□□□ -0.33
Shank1D3YZU1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.96□□□□□ -0.33
Shank1D3YZU1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shank1D3YZU1 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.96□□□□□ -0.34
Shank1D3YZU1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Shank1D3YZU1 AA619741-201ENSMUST00000195095 646 ntBASIC12.96□□□□□ -0.34
Shank1D3YZU1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Gm45453-201ENSMUST00000211758 853 ntBASIC12.96□□□□□ -0.34
Shank1D3YZU1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shank1D3YZU1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shank1D3YZU1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.95□□□□□ -0.34
Shank1D3YZU1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.95□□□□□ -0.34
Shank1D3YZU1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Gm13226-201ENSMUST00000117838 404 ntBASIC12.95□□□□□ -0.34
Shank1D3YZU1 Gm12341-201ENSMUST00000119724 503 ntBASIC12.95□□□□□ -0.34
Shank1D3YZU1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Gm33320-201ENSMUST00000192232 530 ntBASIC12.95□□□□□ -0.34
Shank1D3YZU1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.95□□□□□ -0.34
Shank1D3YZU1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 BC001981-202ENSMUST00000191393 1545 ntBASIC12.95□□□□□ -0.34
Shank1D3YZU1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.95□□□□□ -0.34
Shank1D3YZU1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shank1D3YZU1 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.95□□□□□ -0.34
Shank1D3YZU1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.94□□□□□ -0.34
Shank1D3YZU1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shank1D3YZU1 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms