Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Gm44645-201ENSMUST00000205492 1653 ntBASIC19.58■□□□□ 0.72
Tmf1B9EKI3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tmf1B9EKI3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Tmf1B9EKI3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tmf1B9EKI3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tmf1B9EKI3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Gm44344-201ENSMUST00000200287 129 ntBASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Gm9856-201ENSMUST00000217077 2578 ntBASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tmf1B9EKI3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Tmf1B9EKI3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmf1B9EKI3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC19.56■□□□□ 0.72
Tmf1B9EKI3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmf1B9EKI3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmf1B9EKI3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Tmf1B9EKI3 Mir1897-201ENSMUST00000122581 272 ntBASIC19.56■□□□□ 0.72
Tmf1B9EKI3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmf1B9EKI3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmf1B9EKI3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tmf1B9EKI3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmf1B9EKI3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmf1B9EKI3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tmf1B9EKI3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tmf1B9EKI3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Gm15653-201ENSMUST00000119247 907 ntBASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Mir6977-201ENSMUST00000184960 64 ntBASIC19.55■□□□□ 0.72
Tmf1B9EKI3 AC102291.3-201ENSMUST00000226566 405 ntBASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tmf1B9EKI3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Gm11424-201ENSMUST00000121929 829 ntBASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tmf1B9EKI3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tmf1B9EKI3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms