Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.06□□□□□ -0.16
Clip3B9EHT4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.06□□□□□ -0.16
Clip3B9EHT4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Gm43474-201ENSMUST00000196415 774 ntBASIC14.06□□□□□ -0.16
Clip3B9EHT4 Gm43767-201ENSMUST00000198933 381 ntBASIC14.06□□□□□ -0.16
Clip3B9EHT4 Gm43125-201ENSMUST00000201724 730 ntBASIC14.06□□□□□ -0.16
Clip3B9EHT4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.06□□□□□ -0.16
Clip3B9EHT4 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.06□□□□□ -0.16
Clip3B9EHT4 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.06□□□□□ -0.16
Clip3B9EHT4 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.06□□□□□ -0.16
Clip3B9EHT4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.06□□□□□ -0.16
Clip3B9EHT4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.06□□□□□ -0.16
Clip3B9EHT4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Clip3B9EHT4 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.06□□□□□ -0.16
Clip3B9EHT4 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.05□□□□□ -0.16
Clip3B9EHT4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.05□□□□□ -0.16
Clip3B9EHT4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Gm5312-201ENSMUST00000203728 547 ntBASIC14.05□□□□□ -0.16
Clip3B9EHT4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.05□□□□□ -0.16
Clip3B9EHT4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Clip3B9EHT4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.04□□□□□ -0.16
Clip3B9EHT4 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.04□□□□□ -0.16
Clip3B9EHT4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Clip3B9EHT4 Gm6973-201ENSMUST00000117080 721 ntBASIC14.04□□□□□ -0.16
Clip3B9EHT4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.04□□□□□ -0.16
Clip3B9EHT4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.04□□□□□ -0.16
Clip3B9EHT4 Gm15483-201ENSMUST00000120338 456 ntBASIC14.04□□□□□ -0.16
Clip3B9EHT4 Gm11543-201ENSMUST00000120758 370 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms