Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn1aA2APX8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn1aA2APX8 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.1■□□□□ 0.01
Scn1aA2APX8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.1■□□□□ 0.01
Scn1aA2APX8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.1■□□□□ 0.01
Scn1aA2APX8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.1■□□□□ 0.01
Scn1aA2APX8 Gm44608-201ENSMUST00000206827 855 ntBASIC15.1■□□□□ 0.01
Scn1aA2APX8 Gm46209-201ENSMUST00000217912 553 ntBASIC15.1■□□□□ 0.01
Scn1aA2APX8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.1■□□□□ 0.01
Scn1aA2APX8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn1aA2APX8 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn1aA2APX8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.09■□□□□ 0.01
Scn1aA2APX8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Gm9522-201ENSMUST00000182394 926 ntBASIC15.09■□□□□ 0.01
Scn1aA2APX8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.09■□□□□ 0.01
Scn1aA2APX8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.09■□□□□ 0.01
Scn1aA2APX8 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.09■□□□□ 0.01
Scn1aA2APX8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.09■□□□□ 0.01
Scn1aA2APX8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Gm18027-201ENSMUST00000218947 619 ntBASIC15.09■□□□□ 0.01
Scn1aA2APX8 Gm6218-201ENSMUST00000219812 628 ntBASIC15.09■□□□□ 0.01
Scn1aA2APX8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Scn1aA2APX8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scn1aA2APX8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Scn1aA2APX8 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.08■□□□□ 0.01
Scn1aA2APX8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scn1aA2APX8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Scn1aA2APX8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.08■□□□□ 0.01
Scn1aA2APX8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Scn1aA2APX8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Scn1aA2APX8 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.08■□□□□ 0
Scn1aA2APX8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn1aA2APX8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn1aA2APX8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scn1aA2APX8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.08■□□□□ 0
Scn1aA2APX8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Scn1aA2APX8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.08■□□□□ 0
Scn1aA2APX8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scn1aA2APX8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms