Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.44□□□□□ -0.1
Ccdc194A0A140LIT1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc194A0A140LIT1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc194A0A140LIT1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 Gm2651-201ENSMUST00000203560 838 ntBASIC14.41□□□□□ -0.1
Ccdc194A0A140LIT1 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms