Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Gm6736-201ENSMUST00000166583 948 ntBASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.6■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm18766-201ENSMUST00000189811 808 ntBASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.59■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Gm18049-201ENSMUST00000208909 581 ntBASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Atg4a-psA0A0G2JFS9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atg4a-psA0A0G2JFS9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms