Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm27357-201ENSMUST00000183754 135 ntBASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 AC164567.1-201ENSMUST00000219185 960 ntBASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 AC159106.1-201ENSMUST00000224421 690 ntBASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm45546-201ENSMUST00000211053 2394 ntBASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC9.98□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav13-4-dv7A0A075B6C2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms