Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav5-4A0A075B652 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav5-4A0A075B652 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.15□□□□□ -0.47
Trav5-4A0A075B652 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav5-4A0A075B652 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav5-4A0A075B652 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav5-4A0A075B652 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Gm27300-201ENSMUST00000184085 97 ntBASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Gm27335-201ENSMUST00000184758 97 ntBASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav5-4A0A075B652 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Gm12008-201ENSMUST00000117791 755 ntBASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav5-4A0A075B652 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.12□□□□□ -0.47
Trav5-4A0A075B652 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms