Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lgr5Q9Z1P4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lgr5Q9Z1P4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lgr5Q9Z1P4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lgr5Q9Z1P4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lgr5Q9Z1P4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lgr5Q9Z1P4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lgr5Q9Z1P4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lgr5Q9Z1P4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lgr5Q9Z1P4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lgr5Q9Z1P4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lgr5Q9Z1P4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lgr5Q9Z1P4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lgr5Q9Z1P4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Gm18062-201ENSMUST00000208020 547 ntBASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Gm18055-201ENSMUST00000208254 547 ntBASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lgr5Q9Z1P4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lgr5Q9Z1P4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lgr5Q9Z1P4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lgr5Q9Z1P4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lgr5Q9Z1P4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lgr5Q9Z1P4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Lgr5Q9Z1P4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms