Protein–RNA interactions for Protein: Q9Z1J2

Nek4, Serine/threonine-protein kinase Nek4, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek4Q9Z1J2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nek4Q9Z1J2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Gm27741-201ENSMUST00000185060 237 ntBASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nek4Q9Z1J2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Nek4Q9Z1J2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nek4Q9Z1J2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nek4Q9Z1J2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nek4Q9Z1J2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nek4Q9Z1J2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nek4Q9Z1J2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Nek4Q9Z1J2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms