Protein–RNA interactions for Protein: Q9WUT7

Ccr9, C-C chemokine receptor type 9, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9Q9WUT7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr9Q9WUT7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr9Q9WUT7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr9Q9WUT7 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr9Q9WUT7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr9Q9WUT7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr9Q9WUT7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr9Q9WUT7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr9Q9WUT7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccr9Q9WUT7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccr9Q9WUT7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccr9Q9WUT7 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccr9Q9WUT7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Ccr9Q9WUT7 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.65□□□□□ -0.39
Ccr9Q9WUT7 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Gm10819-201ENSMUST00000099988 561 ntBASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccr9Q9WUT7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Mir5131-201ENSMUST00000175426 93 ntBASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Gm9182-201ENSMUST00000217829 639 ntBASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Gm10154-201ENSMUST00000084445 354 ntBASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccr9Q9WUT7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccr9Q9WUT7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms