Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
CcsQ9WU84 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CcsQ9WU84 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CcsQ9WU84 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
CcsQ9WU84 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
CcsQ9WU84 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CcsQ9WU84 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
CcsQ9WU84 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.3□□□□□ -0.6
CcsQ9WU84 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.3□□□□□ -0.6
CcsQ9WU84 Mir8098-201ENSMUST00000184011 137 ntBASIC11.3□□□□□ -0.6
CcsQ9WU84 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.3□□□□□ -0.6
CcsQ9WU84 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.3□□□□□ -0.6
CcsQ9WU84 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.3□□□□□ -0.6
CcsQ9WU84 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.3□□□□□ -0.6
CcsQ9WU84 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CcsQ9WU84 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CcsQ9WU84 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CcsQ9WU84 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CcsQ9WU84 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.29□□□□□ -0.6
CcsQ9WU84 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CcsQ9WU84 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
CcsQ9WU84 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
CcsQ9WU84 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
CcsQ9WU84 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CcsQ9WU84 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CcsQ9WU84 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.29□□□□□ -0.6
CcsQ9WU84 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.29□□□□□ -0.6
CcsQ9WU84 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.29□□□□□ -0.6
CcsQ9WU84 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
CcsQ9WU84 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.29□□□□□ -0.6
CcsQ9WU84 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.29□□□□□ -0.6
CcsQ9WU84 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.29□□□□□ -0.6
CcsQ9WU84 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.29□□□□□ -0.6
CcsQ9WU84 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.29□□□□□ -0.6
CcsQ9WU84 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.29□□□□□ -0.6
CcsQ9WU84 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.29□□□□□ -0.6
CcsQ9WU84 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
CcsQ9WU84 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CcsQ9WU84 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CcsQ9WU84 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms