Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.5□□□□□ -0.09
Scn8aQ9WTU3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn8aQ9WTU3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn8aQ9WTU3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn8aQ9WTU3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Scn8aQ9WTU3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Scn8aQ9WTU3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn8aQ9WTU3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.5□□□□□ -0.09
Scn8aQ9WTU3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Scn8aQ9WTU3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.5□□□□□ -0.09
Scn8aQ9WTU3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn8aQ9WTU3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Gm7488-201ENSMUST00000117148 684 ntBASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Gm27437-201ENSMUST00000183429 107 ntBASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Scn8aQ9WTU3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Gm6218-201ENSMUST00000219812 628 ntBASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scn8aQ9WTU3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Gm12585-201ENSMUST00000117307 290 ntBASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Gm27838-201ENSMUST00000184829 128 ntBASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scn8aQ9WTU3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms