Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chaf1aQ9QWF0 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.27■□□□□ 0.19
Chaf1aQ9QWF0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Chaf1aQ9QWF0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.27■□□□□ 0.19
Chaf1aQ9QWF0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chaf1aQ9QWF0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.27■□□□□ 0.19
Chaf1aQ9QWF0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Gm12008-201ENSMUST00000117791 755 ntBASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 AV026068-213ENSMUST00000223675 1171 ntBASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chaf1aQ9QWF0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Gm15590-201ENSMUST00000078419 552 ntBASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chaf1aQ9QWF0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Gm13036-201ENSMUST00000117799 748 ntBASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Chaf1aQ9QWF0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1aQ9QWF0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1aQ9QWF0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1aQ9QWF0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1aQ9QWF0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1aQ9QWF0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Chaf1aQ9QWF0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chaf1aQ9QWF0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms