Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sec61a2Q9JLR1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Sec61a2Q9JLR1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sec61a2Q9JLR1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Sec61a2Q9JLR1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Sec61a2Q9JLR1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sec61a2Q9JLR1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Carlr-201ENSMUST00000181515 2574 ntBASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Gm25911-201ENSMUST00000157621 56 ntBASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Mir3113-201ENSMUST00000175478 76 ntBASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sec61a2Q9JLR1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sec61a2Q9JLR1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms