Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Gm14042-201ENSMUST00000120139 833 ntBASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgn5Q9JL35 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Gm8749-201ENSMUST00000117737 331 ntBASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmgn5Q9JL35 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hmgn5Q9JL35 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms